Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna processing protein rimm | SAMN05421820_109222 | Not Available | Positive | 5872309 - 5872836 | 20594.3 |
| trna (guanine37-n1)-methyltransferase | SAMN05421820_109223 | Not Available | Positive | 5872851 - 5873528 | 25216.1 |
| hypothetical protein | SAMN05421820_109224 | Not Available | Negative | 5873525 - 5873884 | 13649.5 |
| hypothetical protein | SAMN05421820_109225 | Not Available | Positive | 5874008 - 5874316 | 11929.5 |
| hypothetical protein | SAMN05421820_109226 | Not Available | Positive | 5874500 - 5874796 | 11349.7 |
| large subunit ribosomal protein l19 | SAMN05421820_109227 | Not Available | Positive | 5874989 - 5875336 | 13077.0 |
| glutamate dehydrogenase/leucine dehydrogenase | SAMN05421820_109228 | Not Available | Positive | 5875504 - 5876730 | 45278.5 |
| mscs family membrane protein | SAMN05421820_109229 | Not Available | Positive | 5876732 - 5877883 | 42876.8 |
| phosphatidylserine decarboxylase | SAMN05421820_109230 | Not Available | Negative | 5878327 - 5878986 | 24980.6 |
| hypoxanthine phosphoribosyltransferase | SAMN05421820_109231 | Not Available | Negative | 5879040 - 5879597 | 20769.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

