Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN05421820_109182 | Not Available | Positive | 5827734 - 5829596 | 69485.1 |
| ig-like domain-containing protein | SAMN05421820_109183 | Not Available | Positive | 5829740 - 5831368 | 61488.5 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN05421820_109184 | Not Available | Negative | 5831375 - 5831884 | 18385.3 |
| l-aspartate oxidase | SAMN05421820_109185 | Not Available | Negative | 5831888 - 5833474 | 59188.5 |
| quinolinate synthetase | SAMN05421820_109186 | Not Available | Positive | 5833875 - 5834867 | 36711.4 |
| thiamine-phosphate kinase | SAMN05421820_109187 | Not Available | Positive | 5834955 - 5835995 | 38259.0 |
| dna recombination protein rmuc | SAMN05421820_109188 | Not Available | Negative | 5835990 - 5837312 | 50276.1 |
| glycine/d-amino acid oxidase | SAMN05421820_109189 | Not Available | Negative | 5837383 - 5838522 | 42179.2 |
| hypothetical protein | SAMN05421820_109190 | Not Available | Positive | 5838609 - 5839304 | 25717.3 |
| apag protein | SAMN05421820_109191 | Not Available | Negative | 5839301 - 5839687 | 14601.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

