Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-keto-8-aminopelargonate synthetase | SAMN05421820_109172 | Not Available | Negative | 5814799 - 5815830 | 37949.2 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN05421820_109173 | Not Available | Negative | 5815817 - 5817166 | 50502.1 |
| aspartyl protease | SAMN05421820_109174 | Not Available | Positive | 5817196 - 5818446 | 46176.8 |
| hypothetical protein | SAMN05421820_109175 | Not Available | Positive | 5818509 - 5819447 | 36080.2 |
| cold shock protein (beta-ribbon, cspa family) | SAMN05421820_109176 | Not Available | Positive | 5819544 - 5819735 | 6960.28 |
| glycerophosphoryl diester phosphodiesterase | SAMN05421820_109177 | Not Available | Negative | 5819800 - 5820588 | 29859.1 |
| hypothetical protein | SAMN05421820_109178 | Not Available | Positive | 5820711 - 5824022 | 126463.0 |
| rrna maturation rnase ybey | SAMN05421820_109179 | Not Available | Positive | 5824033 - 5824473 | 16999.6 |
| hypothetical protein | SAMN05421820_109180 | Not Available | Positive | 5824657 - 5824776 | 4198.45 |
| atp-binding cassette, subfamily f, uup | SAMN05421820_109181 | Not Available | Positive | 5825119 - 5826978 | 70741.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

