Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | SAMN05421820_109162 | Not Available | Negative | 5804922 - 5805536 | 23442.0 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | SAMN05421820_109163 | Not Available | Negative | 5805548 - 5806333 | 28448.3 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | SAMN05421820_109164 | Not Available | Negative | 5806330 - 5807742 | 52006.4 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMN05421820_109165 | Not Available | Negative | 5807742 - 5808815 | 38326.6 |
| hypothetical protein | SAMN05421820_109166 | Not Available | Negative | 5808937 - 5810160 | 46845.8 |
| response regulator receiver domain-containing protein | SAMN05421820_109167 | Not Available | Positive | 5810265 - 5811821 | 60419.2 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN05421820_109168 | Not Available | Positive | 5811903 - 5812319 | 15954.0 |
| alanine dehydrogenase | SAMN05421820_109169 | Not Available | Positive | 5812382 - 5813608 | 44086.8 |
| d-alanyl-d-alanine dipeptidase | SAMN05421820_109170 | Not Available | Positive | 5813615 - 5814301 | 26470.2 |
| histidine phosphatase superfamily (branch 1) | SAMN05421820_109171 | Not Available | Negative | 5814296 - 5814802 | 19178.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

