Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_109152 | Not Available | Negative | 5795839 - 5796651 | 30322.6 |
| copper chaperone copz | SAMN05421820_109153 | Not Available | Negative | 5796659 - 5797195 | 19087.1 |
| hypothetical protein | SAMN05421820_109154 | Not Available | Negative | 5797296 - 5797694 | 14367.9 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN05421820_109155 | Not Available | Positive | 5797789 - 5798517 | 27467.0 |
| exodeoxyribonuclease-3 | SAMN05421820_109156 | Not Available | Positive | 5798528 - 5799298 | 29567.2 |
| imidazolonepropionase | SAMN05421820_109157 | Not Available | Positive | 5799302 - 5800546 | 44381.7 |
| formiminoglutamase | SAMN05421820_109158 | Not Available | Positive | 5800546 - 5801517 | 35262.7 |
| ompa family protein | SAMN05421820_109159 | Not Available | Negative | 5801564 - 5803348 | 65560.8 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN05421820_109160 | Not Available | Negative | 5803434 - 5804003 | 21904.6 |
| elongation factor p | SAMN05421820_109161 | Not Available | Negative | 5804204 - 5804812 | 23223.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

