Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_109132 | Not Available | Positive | 5771366 - 5771722 | 12827.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_109133 | Not Available | Positive | 5771782 - 5772363 | 22359.9 |
| hypothetical protein | SAMN05421820_109134 | Not Available | Positive | 5772360 - 5772845 | 18412.3 |
| protein of unknown function | SAMN05421820_109135 | Not Available | Negative | 5772916 - 5773470 | 20629.1 |
| hypothetical protein | SAMN05421820_109136 | Not Available | Negative | 5773639 - 5773821 | 6607.11 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05421820_109137 | Not Available | Negative | 5773877 - 5776378 | 95530.4 |
| dna-binding transcriptional regulator, acrr family | SAMN05421820_109138 | Not Available | Positive | 5776511 - 5777131 | 23359.7 |
| outer membrane protein tolc | SAMN05421820_109139 | Not Available | Positive | 5777128 - 5778441 | 48617.3 |
| membrane fusion protein, multidrug efflux system | SAMN05421820_109140 | Not Available | Positive | 5778462 - 5779505 | 37163.3 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05421820_109141 | Not Available | Positive | 5779511 - 5781058 | 56174.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

