Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ntrc family, response regulator hydg | SAMN05421820_109112 | Not Available | Negative | 5749233 - 5750633 | 52204.6 |
| enoyl-coa hydratase | SAMN05421820_109113 | Not Available | Negative | 5750809 - 5751591 | 27910.8 |
| methylmalonyl-coa mutase, c-terminal domain | SAMN05421820_109114 | Not Available | Negative | 5751595 - 5752014 | 15206.8 |
| glutaminyl-trna synthetase | SAMN05421820_109115 | Not Available | Positive | 5752062 - 5753756 | 65096.9 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05421820_109116 | Not Available | Negative | 5754002 - 5754835 | 30901.2 |
| peptidase family m49 | SAMN05421820_109117 | Not Available | Positive | 5754974 - 5756656 | 62341.8 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN05421820_109118 | Not Available | Positive | 5756913 - 5757320 | 14940.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421820_109119 | Not Available | Positive | 5757323 - 5759350 | 75912.2 |
| two-component system, cell cycle response regulator divk | SAMN05421820_109120 | Not Available | Negative | 5759357 - 5759725 | 13455.1 |
| two-component system, chemotaxis family, response regulator cheb | SAMN05421820_109121 | Not Available | Negative | 5759741 - 5760304 | 20664.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

