Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein terc, possibly involved in tellurium resistance | SAMN05421820_109102 | Not Available | Negative | 5740332 - 5741111 | 28382.9 |
| hypothetical protein | SAMN05421820_109103 | Not Available | Negative | 5741212 - 5742531 | 47701.4 |
| hypothetical protein | SAMN05421820_109104 | Not Available | Negative | 5742528 - 5743061 | 20405.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_109105 | Not Available | Negative | 5743064 - 5743507 | 17466.8 |
| agmatine deiminase | SAMN05421820_109106 | Not Available | Negative | 5743781 - 5744920 | 43195.0 |
| aspartyl-trna synthetase | SAMN05421820_109107 | Not Available | Positive | 5745205 - 5746950 | 66271.6 |
| hypothetical protein | SAMN05421820_109108 | Not Available | Negative | 5747021 - 5747464 | 16449.9 |
| putative holin-x, holin superfamily iii | SAMN05421820_109109 | Not Available | Negative | 5747448 - 5747831 | 14790.1 |
| gas vesicle protein | SAMN05421820_109110 | Not Available | Negative | 5747854 - 5748120 | 9361.06 |
| predicted purr-regulated permease perm | SAMN05421820_109111 | Not Available | Negative | 5748174 - 5749226 | 39332.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

