Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase, fe-mn family | SAMN05421820_10992 | Not Available | Negative | 5731657 - 5732262 | 22317.3 |
| trna(adenine34) deaminase | SAMN05421820_10993 | Not Available | Negative | 5732346 - 5732819 | 17306.7 |
| pp_04711 | SAMN05421820_10994 | Not Available | Negative | 5732820 - 5733155 | Not Available |
| hypothetical protein | SAMN05421820_10995 | Not Available | Positive | 5733354 - 5734013 | 25041.7 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05421820_10996 | Not Available | Positive | 5734444 - 5735079 | 23418.6 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN05421820_10997 | Not Available | Positive | 5735110 - 5736294 | 44209.9 |
| hypothetical protein | SAMN05421820_10998 | Not Available | Negative | 5736291 - 5736548 | 9282.52 |
| sugar transporter | SAMN05421820_10999 | Not Available | Negative | 5736562 - 5738091 | 55649.4 |
| putative membrane protein | SAMN05421820_109100 | Not Available | Positive | 5738363 - 5739262 | 34832.4 |
| hypothetical protein | SAMN05421820_109101 | Not Available | Negative | 5739267 - 5740322 | 40905.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

