Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05421820_10982 | Not Available | Positive | 5722600 - 5723277 | 24974.9 |
| dna polymerase i | SAMN05421820_10983 | Not Available | Negative | 5723496 - 5726306 | 104637.0 |
| hypothetical protein | SAMN05421820_10984 | Not Available | Positive | 5726507 - 5727196 | 24673.0 |
| dna-3-methyladenine glycosylase i | SAMN05421820_10985 | Not Available | Negative | 5727210 - 5727770 | 21291.5 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05421820_10986 | Not Available | Negative | 5727775 - 5728116 | 13018.7 |
| methylated-dna-protein-cysteine methyltransferase related protein | SAMN05421820_10987 | Not Available | Negative | 5728163 - 5728489 | 11786.3 |
| trna (guanine-n7-)-methyltransferase | SAMN05421820_10988 | Not Available | Negative | 5728513 - 5729184 | 26269.4 |
| gdp-l-fucose synthase | SAMN05421820_10989 | Not Available | Positive | 5729259 - 5730203 | 35329.3 |
| hypothetical protein | SAMN05421820_10990 | Not Available | Negative | 5730013 - 5730480 | 17502.1 |
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN05421820_10991 | Not Available | Positive | 5730652 - 5731584 | 35365.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

