Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide adenylyltransferase | SAMN05421820_10962 | Not Available | Positive | 5698560 - 5699132 | 21844.5 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05421820_10963 | Not Available | Negative | 5699129 - 5699842 | 26388.1 |
| hypothetical protein | SAMN05421820_10964 | Not Available | Positive | 5700139 - 5701578 | 55530.7 |
| peptide chain release factor 3 | SAMN05421820_10965 | Not Available | Positive | 5701695 - 5703275 | 59716.4 |
| aspartate aminotransferase | SAMN05421820_10966 | Not Available | Negative | 5703330 - 5704583 | 45742.1 |
| argininosuccinate lyase | SAMN05421820_10967 | Not Available | Negative | 5704610 - 5705941 | 49720.1 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN05421820_10968 | Not Available | Positive | 5706125 - 5709013 | 107695.0 |
| acetylornithine deacetylase | SAMN05421820_10969 | Not Available | Negative | 5709088 - 5710155 | 39256.8 |
| pyrroline-5-carboxylate reductase | SAMN05421820_10970 | Not Available | Negative | 5710163 - 5710981 | 28631.8 |
| n-acetylglutamate kinase | SAMN05421820_10971 | Not Available | Negative | 5711029 - 5711817 | 28004.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

