Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, luxr family | SAMN05421820_101454 | Not Available | Positive | 568142 - 569137 | 37570.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421820_101455 | Not Available | Positive | 569121 - 569714 | 24058.5 |
| tipas antibiotic-recognition domain-containing protein | SAMN05421820_101456 | Not Available | Positive | 569731 - 570276 | 20949.4 |
| hypothetical protein | SAMN05421820_101457 | Not Available | Positive | 570595 - 571098 | 19282.6 |
| hypothetical protein | SAMN05421820_101458 | Not Available | Positive | 571182 - 571424 | 8033.76 |
| hypothetical protein | SAMN05421820_101459 | Not Available | Positive | 571485 - 572525 | 39647.4 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421820_101460 | Not Available | Negative | 572529 - 573854 | 50652.8 |
| susd family protein | SAMN05421820_101461 | Not Available | Negative | 573888 - 575315 | 53685.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_101462 | Not Available | Negative | 575338 - 578349 | 110827.0 |
| hypothetical protein | SAMN05421820_101463 | Not Available | Positive | 578952 - 579482 | 19910.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

