Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_04640 | SAMN05421820_10921 | Not Available | Positive | 5650166 - 5651566 | Not Available |
| heterokaryon incompatibility protein het-c | SAMN05421820_10922 | Not Available | Negative | 5651612 - 5655220 | 135815.0 |
| hypothetical protein | SAMN05421820_10923 | Not Available | Negative | 5655224 - 5656009 | 29775.6 |
| hypothetical protein | SAMN05421820_10924 | Not Available | Negative | 5656206 - 5657024 | 31492.9 |
| uncharacterized conserved protein, implicated in type vi secretion and phage assembly | SAMN05421820_10925 | Not Available | Negative | 5657024 - 5658847 | 67295.9 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN05421820_10926 | Not Available | Negative | 5659044 - 5660063 | 39763.6 |
| spfh domain / band 7 family protein | SAMN05421820_10928 | Not Available | Positive | 5660964 - 5662058 | 41800.0 |
| hypothetical protein | SAMN05421820_10929 | Not Available | Positive | 5662153 - 5662929 | 29570.8 |
| predicted nucleotidyltransferase | SAMN05421820_10930 | Not Available | Positive | 5662904 - 5663962 | 40802.0 |
| pp_04649 | SAMN05421820_10931 | Not Available | Positive | 5663973 - 5665397 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

