Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05421820_108264 | Not Available | Positive | 5580321 - 5583479 | 114802.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05421820_108265 | Not Available | Positive | 5583489 - 5584877 | 50470.3 |
| n-acetylglutamate synthase, gnat family | SAMN05421820_108266 | Not Available | Positive | 5584923 - 5585348 | 16267.6 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN05421820_108267 | Not Available | Negative | 5585550 - 5588780 | 119739.0 |
| protein of unknown function | SAMN05421820_108268 | Not Available | Negative | 5588804 - 5589814 | 38481.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_108269 | Not Available | Negative | 5589903 - 5590478 | 22741.6 |
| calcineurin-like phosphoesterase | SAMN05421820_108270 | Not Available | Positive | 5590685 - 5592154 | 55268.3 |
| hypothetical protein | SAMN05421820_108271 | Not Available | Negative | 5592156 - 5592254 | 3613.43 |
| alpha-glucosidase, glycosyl hydrolase family gh31 | SAMN05421820_108272 | Not Available | Negative | 5592418 - 5596353 | 146605.0 |
| hypothetical protein | SAMN05421820_108273 | Not Available | Positive | 5596747 - 5596929 | 6653.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

