Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa reductase | SAMN05421820_108254 | Not Available | Negative | 5569136 - 5570767 | 60474.0 |
| mfs transporter, acs family, hexuronate transporter | SAMN05421820_108255 | Not Available | Negative | 5570795 - 5572147 | 49836.5 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN05421820_108256 | Not Available | Negative | 5572202 - 5572861 | 24139.5 |
| 2-dehydro-3-deoxygluconokinase | SAMN05421820_108257 | Not Available | Negative | 5572901 - 5573926 | 37935.4 |
| glucuronate isomerase | SAMN05421820_108258 | Not Available | Negative | 5573933 - 5575333 | 54084.8 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN05421820_108259 | Not Available | Negative | 5575456 - 5576262 | 29589.3 |
| n-hydroxyarylamine o-acetyltransferase | SAMN05421820_108260 | Not Available | Negative | 5576845 - 5577600 | 29246.2 |
| predicted transcriptional regulator, arsr family | SAMN05421820_108261 | Not Available | Negative | 5577611 - 5578210 | 22106.5 |
| protein of unknown function | SAMN05421820_108262 | Not Available | Positive | 5578676 - 5579185 | 19658.0 |
| membrane fusion protein, multidrug efflux system | SAMN05421820_108263 | Not Available | Positive | 5579186 - 5580313 | 40548.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

