Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotransferase enzyme family protein | SAMN05421820_108244 | Not Available | Positive | 5555152 - 5556231 | 41066.6 |
| choline dehydrogenase | SAMN05421820_108245 | Not Available | Negative | 5556176 - 5557873 | 63796.3 |
| gluconate 2-dehydrogenase subunit 3 | SAMN05421820_108246 | Not Available | Negative | 5557886 - 5558383 | 18390.7 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421820_108247 | Not Available | Negative | 5558402 - 5560972 | 95033.0 |
| sialidase-1 | SAMN05421820_108248 | Not Available | Negative | 5561108 - 5562310 | 44391.1 |
| hypothetical protein | SAMN05421820_108249 | Not Available | Negative | 5562356 - 5563552 | 46392.6 |
| superfamily ii dna or rna helicase, snf2 family | SAMN05421820_108250 | Not Available | Negative | 5563622 - 5566981 | 128900.0 |
| predicted o-methyltransferase yrrm | SAMN05421820_108251 | Not Available | Negative | 5567035 - 5567619 | 21683.7 |
| 5'(3')-deoxyribonucleotidase | SAMN05421820_108252 | Not Available | Negative | 5567712 - 5568263 | 21240.5 |
| dna-binding transcriptional regulator of sugar metabolism, deor/glpr family | SAMN05421820_108253 | Not Available | Positive | 5568356 - 5569105 | 27618.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

