Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase ii | SAMN05421820_108184 | Not Available | Negative | 5490468 - 5491088 | 22309.9 |
| arac-type dna-binding protein | SAMN05421820_108185 | Not Available | Negative | 5491190 - 5492056 | 32960.8 |
| hypothetical protein | SAMN05421820_108186 | Not Available | Negative | 5492077 - 5492574 | 19323.6 |
| uncharacterized membrane protein yiaa | SAMN05421820_108187 | Not Available | Negative | 5492598 - 5493020 | 15402.8 |
| hypothetical protein | SAMN05421820_108188 | Not Available | Positive | 5493208 - 5493789 | 19911.9 |
| hypothetical protein | SAMN05421820_108189 | Not Available | Positive | 5494149 - 5494460 | 11094.4 |
| rnd family efflux transporter, mfp subunit | SAMN05421820_108190 | Not Available | Positive | 5494701 - 5495822 | 40453.4 |
| hydrophobe/amphiphile efflux-1 (hae1) family protein | SAMN05421820_108191 | Not Available | Positive | 5495855 - 5500318 | 162497.0 |
| histidine kinase | SAMN05421820_108192 | Not Available | Positive | 5500416 - 5501471 | 40790.1 |
| dna-binding response regulator, lytr/algr family | SAMN05421820_108193 | Not Available | Positive | 5501458 - 5502219 | 29117.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

