Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN05421820_108164 | Not Available | Positive | 5464205 - 5465287 | 41298.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_108165 | Not Available | Positive | 5465423 - 5468788 | 123790.0 |
| starch-binding associating with outer membrane | SAMN05421820_108166 | Not Available | Positive | 5468808 - 5470697 | 70303.0 |
| hypothetical protein | SAMN05421820_108167 | Not Available | Positive | 5470716 - 5471195 | 17510.0 |
| glycosyl hydrolases family 35 | SAMN05421820_108168 | Not Available | Positive | 5471284 - 5473539 | 85406.9 |
| right handed beta helix region | SAMN05421820_108169 | Not Available | Positive | 5473544 - 5475334 | 67151.1 |
| hypothetical protein | SAMN05421820_108170 | Not Available | Negative | 5475382 - 5476248 | 30768.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_108171 | Not Available | Negative | 5476334 - 5476702 | 13872.8 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05421820_108172 | Not Available | Positive | 5476845 - 5477765 | 34934.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421820_108173 | Not Available | Positive | 5477920 - 5478828 | 32665.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

