Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-xylosidase | SAMN05421820_108154 | Not Available | Negative | 5452396 - 5453955 | 58213.7 |
| hypothetical protein | SAMN05421820_108155 | Not Available | Negative | 5454042 - 5456192 | 80176.7 |
| alpha-l-fucosidase 2 | SAMN05421820_108156 | Not Available | Negative | 5456531 - 5458858 | 86227.5 |
| alpha-glucosidase | SAMN05421820_108157 | Not Available | Negative | 5458961 - 5460865 | 71074.4 |
| hypothetical protein | SAMN05421820_108158 | Not Available | Positive | 5460990 - 5461085 | 3523.15 |
| conserved hypothetical protein | SAMN05421820_108159 | Not Available | Positive | 5461150 - 5461608 | 16912.0 |
| hypothetical protein | SAMN05421820_108160 | Not Available | Negative | 5461663 - 5461956 | 11149.8 |
| ferritin-like metal-binding protein ycie | SAMN05421820_108161 | Not Available | Negative | 5462105 - 5462665 | 20456.2 |
| nicotinamide-nucleotide amidase | SAMN05421820_108162 | Not Available | Positive | 5462937 - 5463437 | 18085.3 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421820_108163 | Not Available | Positive | 5463557 - 5464135 | 22644.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

