Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421820_108124 | Not Available | Positive | 5409499 - 5409984 | 18429.4 |
| putative dna-binding domain-containing protein | SAMN05421820_108125 | Not Available | Positive | 5410009 - 5410635 | 23687.5 |
| multidrug resistance protein, mate family | SAMN05421820_108126 | Not Available | Positive | 5410671 - 5412065 | 50741.8 |
| hypothetical protein | SAMN05421820_108127 | Not Available | Negative | 5412120 - 5413094 | 36429.2 |
| isochorismate pyruvate lyase | SAMN05421820_108128 | Not Available | Negative | 5413091 - 5413453 | 13658.9 |
| hypothetical protein | SAMN05421820_108129 | Not Available | Positive | 5413676 - 5414617 | 33560.9 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05421820_108130 | Not Available | Positive | 5414769 - 5416181 | 52729.5 |
| ghkl domain-containing protein | SAMN05421820_108131 | Not Available | Positive | 5416193 - 5417281 | 43013.9 |
| histidine kinase | SAMN05421820_108132 | Not Available | Positive | 5417285 - 5418349 | 41623.0 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421820_108133 | Not Available | Positive | 5418557 - 5419570 | 37957.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

