Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_101434 | Not Available | Positive | 540972 - 541547 | 22383.2 |
| hypothetical protein | SAMN05421820_101435 | Not Available | Positive | 541550 - 542476 | 35397.5 |
| type iv secretory system conjugative dna transfer | SAMN05421820_101436 | Not Available | Positive | 542494 - 544506 | 75472.6 |
| leucine rich repeat-containing protein | SAMN05421820_101437 | Not Available | Positive | 544738 - 546207 | 56243.0 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421820_101438 | Not Available | Negative | 546281 - 546823 | 20870.4 |
| hypothetical protein | SAMN05421820_101439 | Not Available | Negative | 546828 - 547169 | 13191.9 |
| hypothetical protein | SAMN05421820_101440 | Not Available | Negative | 547918 - 548619 | 27117.8 |
| rna polymerase sigma-70 factor, bacteroides expansion family 1 | SAMN05421820_101441 | Not Available | Positive | 548954 - 549532 | 22604.6 |
| fecr protein | SAMN05421820_101442 | Not Available | Positive | 549645 - 550826 | 43279.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_101443 | Not Available | Positive | 551096 - 554686 | 133347.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

