Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase | SAMN05421820_10894 | Not Available | Positive | 5374812 - 5375759 | 35154.2 |
| pp_04421 | SAMN05421820_10895 | Not Available | Negative | 5375756 - 5376847 | Not Available |
| alpha-1,2-mannosidase, putative | SAMN05421820_10896 | Not Available | Positive | 5377030 - 5379321 | 86536.0 |
| hypothetical protein | SAMN05421820_10897 | Not Available | Negative | 5379536 - 5379856 | 11477.2 |
| uridine phosphorylase | SAMN05421820_10898 | Not Available | Negative | 5379955 - 5380824 | 31883.6 |
| uncharacterized protein, yigz family | SAMN05421820_10899 | Not Available | Negative | 5380943 - 5381557 | 22879.7 |
| eama-like transporter family protein | SAMN05421820_108100 | Not Available | Negative | 5381547 - 5382413 | 31866.6 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase | SAMN05421820_108101 | Not Available | Negative | 5382416 - 5383468 | 39601.9 |
| release factor glutamine methyltransferase | SAMN05421820_108102 | Not Available | Positive | 5383517 - 5384383 | 32919.6 |
| integrase/recombinase xerd | SAMN05421820_108103 | Not Available | Negative | 5384515 - 5385375 | 32265.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

