Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna recognition motif. (a.k.a. rrm, rbd, or rnp domain) | SAMN05421820_10884 | Not Available | Positive | 5358845 - 5359153 | 11071.1 |
| hypothetical protein | SAMN05421820_10885 | Not Available | Negative | 5359260 - 5359859 | 22281.2 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN05421820_10886 | Not Available | Positive | 5359958 - 5361184 | 47799.1 |
| uncharacterized membrane protein yhhn | SAMN05421820_10887 | Not Available | Positive | 5361159 - 5361848 | 26313.6 |
| penicillin-binding protein 1c | SAMN05421820_10888 | Not Available | Negative | 5361845 - 5364235 | 89976.2 |
| hypothetical protein | SAMN05421820_10889 | Not Available | Negative | 5364237 - 5369846 | 207175.0 |
| hypothetical protein | SAMN05421820_10890 | Not Available | Negative | 5369920 - 5370324 | 15286.7 |
| dna topoisomerase i | SAMN05421820_10891 | Not Available | Negative | 5370347 - 5372911 | 95954.4 |
| glutathione peroxidase | SAMN05421820_10892 | Not Available | Positive | 5373453 - 5373965 | 19301.4 |
| 5'-nucleotidase, c-terminal domain | SAMN05421820_10893 | Not Available | Positive | 5374055 - 5374834 | 29311.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

