Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-glycero-d-manno-heptose 1,7-bisphosphate phosphatase | SAMN05421820_1083 | Not Available | Positive | 5267128 - 5267622 | 18438.2 |
| transaldolase | SAMN05421820_1084 | Not Available | Negative | 5267655 - 5268314 | 23528.6 |
| glutamate synthase (nadph/nadh) large chain | SAMN05421820_1086 | Not Available | Positive | 5268909 - 5273414 | 165503.0 |
| glutamate synthase (nadph/nadh) small chain | SAMN05421820_1087 | Not Available | Positive | 5273490 - 5274956 | 53670.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_1088 | Not Available | Positive | 5275579 - 5278623 | 109997.0 |
| starch-binding associating with outer membrane | SAMN05421820_1089 | Not Available | Positive | 5278635 - 5280059 | 51666.4 |
| bacteriocin-protection, ydei or ompd-associated | SAMN05421820_10810 | Not Available | Negative | 5280139 - 5280801 | 25144.6 |
| spou rrna methylase family protein | SAMN05421820_10811 | Not Available | Negative | 5280831 - 5281361 | 19663.7 |
| galactokinase | SAMN05421820_10812 | Not Available | Negative | 5281399 - 5282550 | 42487.6 |
| aldose 1-epimerase | SAMN05421820_10813 | Not Available | Positive | 5282635 - 5283672 | 38653.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

