Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi | SAMN05421820_107417 | Not Available | Negative | 5232574 - 5233182 | 22939.7 |
| protein sco1/2 | SAMN05421820_107418 | Not Available | Positive | 5233377 - 5234030 | 25020.1 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05421820_107419 | Not Available | Positive | 5234033 - 5234455 | 15729.1 |
| hypothetical protein | SAMN05421820_107420 | Not Available | Positive | 5234771 - 5235415 | 24075.2 |
| hypothetical protein | SAMN05421820_107421 | Not Available | Positive | 5235555 - 5236196 | 24490.9 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN05421820_107423 | Not Available | Positive | 5236669 - 5238072 | 52141.4 |
| chloride channel protein, cic family | SAMN05421820_107424 | Not Available | Negative | 5238138 - 5239931 | 66149.9 |
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN05421820_107425 | Not Available | Negative | 5239942 - 5240664 | 27342.1 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN05421820_107426 | Not Available | Negative | 5240694 - 5241383 | 26001.8 |
| peroxiredoxin | SAMN05421820_107427 | Not Available | Negative | 5241489 - 5242595 | 41168.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

