Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | SAMN05421820_107406 | Not Available | Negative | 5218061 - 5220379 | 87979.4 |
| signal transduction histidine kinase | SAMN05421820_107408 | Not Available | Negative | 5220800 - 5222554 | 66146.7 |
| two-component system, ompr family, sensor histidine kinase kdpd | SAMN05421820_107409 | Not Available | Negative | 5222630 - 5223757 | 42730.2 |
| hypothetical protein | SAMN05421820_107410 | Not Available | Negative | 5223764 - 5223898 | 5192.74 |
| putative beta-barrel porin-2, ompl-like. bbp2 | SAMN05421820_107411 | Not Available | Negative | 5224023 - 5225093 | 39164.8 |
| k+-transporting atpase atpase c chain | SAMN05421820_107412 | Not Available | Negative | 5225196 - 5225762 | 20176.6 |
| k+-transporting atpase atpase b chain | SAMN05421820_107413 | Not Available | Negative | 5225809 - 5227842 | 72325.6 |
| k+-transporting atpase atpase a chain | SAMN05421820_107414 | Not Available | Negative | 5227852 - 5229570 | 62172.7 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN05421820_107415 | Not Available | Negative | 5229928 - 5231259 | 50104.2 |
| acetylornithine deacetylase | SAMN05421820_107416 | Not Available | Negative | 5231280 - 5232422 | 42490.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

