Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase, g3e family | SAMN05421820_107386 | Not Available | Positive | 5196383 - 5197405 | 38379.7 |
| hypothetical protein | SAMN05421820_107387 | Not Available | Positive | 5197472 - 5197666 | 7423.69 |
| hexosaminidase | SAMN05421820_107388 | Not Available | Negative | 5197902 - 5200424 | 93650.3 |
| predicted acyltransferase | SAMN05421820_107389 | Not Available | Negative | 5200472 - 5201593 | 42055.7 |
| starch-binding associating with outer membrane | SAMN05421820_107390 | Not Available | Negative | 5201689 - 5203476 | 66010.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_107391 | Not Available | Negative | 5203547 - 5207065 | 127810.0 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN05421820_107392 | Not Available | Negative | 5207358 - 5208407 | 39006.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_107393 | Not Available | Negative | 5208481 - 5209059 | 22636.4 |
| hypothetical protein | SAMN05421820_107394 | Not Available | Negative | 5209206 - 5210135 | 34144.0 |
| cytochrome c peroxidase | SAMN05421820_107395 | Not Available | Negative | 5210169 - 5211212 | 39148.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

