Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfur carrier protein | SAMN05421820_107346 | Not Available | Positive | 5146461 - 5146664 | 7383.89 |
| hydroxymethylpyrimidine synthase | SAMN05421820_107347 | Not Available | Positive | 5146724 - 5148607 | 69952.2 |
| thiamine-phosphate pyrophosphorylase | SAMN05421820_107348 | Not Available | Positive | 5148608 - 5149210 | 22682.2 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN05421820_107349 | Not Available | Positive | 5149186 - 5149941 | 27769.3 |
| thiamine-phosphate pyrophosphorylase | SAMN05421820_107350 | Not Available | Positive | 5149938 - 5150591 | 23758.9 |
| thiazole synthase | SAMN05421820_107351 | Not Available | Positive | 5150597 - 5151367 | 27231.1 |
| 2-iminoacetate synthase | SAMN05421820_107352 | Not Available | Positive | 5151357 - 5152469 | 42624.9 |
| adenylyltransferase and sulfurtransferase | SAMN05421820_107353 | Not Available | Positive | 5152474 - 5153520 | 38367.2 |
| hypothetical protein | SAMN05421820_107354 | Not Available | Negative | 5153543 - 5154634 | 42434.9 |
| abc-2 type transport system atp-binding protein | SAMN05421820_107355 | Not Available | Negative | 5154628 - 5155260 | 23652.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

