Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema protein | SAMN05421820_107315 | Not Available | Positive | 5108966 - 5109556 | 22601.2 |
| predicted membrane protein | SAMN05421820_107316 | Not Available | Positive | 5109569 - 5111485 | 70506.3 |
| arac-type dna-binding protein | SAMN05421820_107317 | Not Available | Positive | 5111607 - 5112638 | 39754.9 |
| putative lumazine-binding | SAMN05421820_107318 | Not Available | Positive | 5112740 - 5113087 | 12717.6 |
| putative intracellular protease/amidase | SAMN05421820_107319 | Not Available | Positive | 5113153 - 5114292 | 42531.7 |
| methyltransferase domain-containing protein | SAMN05421820_107320 | Not Available | Negative | 5114509 - 5115174 | 24586.5 |
| protein of unknown function | SAMN05421820_107321 | Not Available | Positive | 5115526 - 5115960 | 15888.1 |
| hypothetical protein | SAMN05421820_107322 | Not Available | Negative | 5115967 - 5116656 | 25699.8 |
| arac-type dna-binding protein | SAMN05421820_107323 | Not Available | Negative | 5116741 - 5117589 | 32403.3 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN05421820_107324 | Not Available | Negative | 5117629 - 5119179 | 57996.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

