Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_107285 | Not Available | Negative | 5081651 - 5081962 | 11424.5 |
| ribose 5-phosphate isomerase b | SAMN05421820_107286 | Not Available | Negative | 5081956 - 5082402 | 16104.3 |
| protein of unknown function | SAMN05421820_107287 | Not Available | Positive | 5082584 - 5083294 | 25290.7 |
| hypothetical protein | SAMN05421820_107288 | Not Available | Negative | 5083363 - 5083872 | 19484.2 |
| hypothetical protein | SAMN05421820_107289 | Not Available | Negative | 5083915 - 5084514 | 23378.0 |
| hypothetical protein | SAMN05421820_107290 | Not Available | Positive | 5084752 - 5085030 | 10832.9 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421820_107291 | Not Available | Positive | 5085040 - 5085714 | 26006.4 |
| signal transduction histidine kinase | SAMN05421820_107292 | Not Available | Positive | 5085715 - 5087034 | 50225.5 |
| predicted transcriptional regulator | SAMN05421820_107293 | Not Available | Positive | 5087268 - 5087636 | 14238.3 |
| blar1 peptidase m56 | SAMN05421820_107294 | Not Available | Positive | 5087636 - 5089039 | 52820.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

