Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| epoxyqueuosine reductase | SAMN05421820_101404 | Not Available | Negative | 507933 - 508874 | 35955.1 |
| hypothetical protein | SAMN05421820_101405 | Not Available | Positive | 508956 - 509168 | 8054.64 |
| predicted amidohydrolase | SAMN05421820_101406 | Not Available | Negative | 509236 - 510744 | 57722.0 |
| holliday junction dna helicase subunit ruvb | SAMN05421820_101407 | Not Available | Negative | 510798 - 511820 | 37744.5 |
| 3-hydroxybutyryl-coa dehydrogenase | SAMN05421820_101408 | Not Available | Negative | 511856 - 512746 | 31812.7 |
| pyridoxamine 5'-phosphate oxidase | SAMN05421820_101409 | Not Available | Negative | 512773 - 513423 | 24518.6 |
| putative transcriptional regulator | SAMN05421820_101410 | Not Available | Positive | 513473 - 514036 | 21217.2 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN05421820_101411 | Not Available | Negative | 514033 - 514524 | 17225.1 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMN05421820_101412 | Not Available | Negative | 514524 - 515663 | 42652.6 |
| hypothetical protein | SAMN05421820_101413 | Not Available | Positive | 515720 - 516910 | 43817.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

