Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_107245 | Not Available | Positive | 5027453 - 5027554 | 3793.38 |
| sam-dependent methyltransferase, mida family | SAMN05421820_107246 | Not Available | Negative | 5027561 - 5028673 | 42119.5 |
| protein of unknown function | SAMN05421820_107247 | Not Available | Negative | 5028868 - 5029353 | 18106.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421820_107248 | Not Available | Negative | 5029412 - 5030206 | 29573.2 |
| gliding motility-associated c-terminal domain-containing protein | SAMN05421820_107249 | Not Available | Positive | 5030726 - 5038030 | 263862.0 |
| xaa-pro aminopeptidase | SAMN05421820_107250 | Not Available | Negative | 5038076 - 5039464 | 51474.6 |
| hypothetical protein | SAMN05421820_107251 | Not Available | Positive | 5039745 - 5040230 | 17313.8 |
| hypothetical protein | SAMN05421820_107252 | Not Available | Positive | 5040444 - 5041334 | 33545.5 |
| hypothetical protein | SAMN05421820_107253 | Not Available | Positive | 5041566 - 5042120 | 21338.8 |
| type vi secretion system (t6ss), amidase effector protein 4 | SAMN05421820_107254 | Not Available | Positive | 5042122 - 5042748 | 24008.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

