Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | SAMN05421820_107235 | Not Available | Negative | 5019224 - 5020612 | 51232.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421820_107236 | Not Available | Negative | 5020651 - 5021250 | 22979.8 |
| predicted phosphoesterase | SAMN05421820_107237 | Not Available | Positive | 5021430 - 5022176 | 28555.0 |
| predicted ntp pyrophosphohydrolase, nudix family | SAMN05421820_107238 | Not Available | Negative | 5022198 - 5022656 | 17326.9 |
| two-component system, ompr family, phosphate regulon response regulator phob/two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN05421820_107239 | Not Available | Negative | 5022827 - 5023231 | 15701.4 |
| dinb superfamily protein | SAMN05421820_107240 | Not Available | Negative | 5023343 - 5023813 | 17518.9 |
| nicotinamide phosphoribosyltransferase | SAMN05421820_107241 | Not Available | Negative | 5023909 - 5025360 | 54440.4 |
| ribose-phosphate pyrophosphokinase | SAMN05421820_107242 | Not Available | Negative | 5025465 - 5026304 | 30770.0 |
| 8-oxo-dgtp diphosphatase | SAMN05421820_107243 | Not Available | Negative | 5026413 - 5027120 | 26602.0 |
| hypothetical protein | SAMN05421820_107244 | Not Available | Positive | 5027254 - 5027436 | 7258.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

