Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase, beta-lactamase superfamily ii | SAMN05421820_107225 | Not Available | Negative | 4957451 - 4958104 | 24739.8 |
| ornithine cyclodeaminase | SAMN05421820_107226 | Not Available | Negative | 4958192 - 4959163 | 35757.4 |
| cysteine synthase a | SAMN05421820_107227 | Not Available | Negative | 4959203 - 4960165 | 35019.9 |
| abc-type multidrug transport system, atpase and permease component | SAMN05421820_107228 | Not Available | Negative | 4960282 - 4962102 | 66752.1 |
| non-ribosomal peptide synthase domain tigr01720/amino acid adenylation domain-containing protein | SAMN05421820_107229 | Not Available | Negative | 4962110 - 4980358 | 679565.0 |
| non-ribosomal peptide synthase domain tigr01720/amino acid adenylation domain-containing protein | SAMN05421820_107230 | Not Available | Negative | 4980413 - 5014393 | 1265580.0 |
| membrane protein | SAMN05421820_107231 | Not Available | Negative | 5015649 - 5016611 | 35065.6 |
| hypothetical protein | SAMN05421820_107232 | Not Available | Negative | 5016598 - 5016975 | 14548.0 |
| abc-2 type transport system permease protein | SAMN05421820_107233 | Not Available | Negative | 5017074 - 5018258 | 44034.8 |
| hlyd family secretion protein | SAMN05421820_107234 | Not Available | Negative | 5018264 - 5019211 | 34481.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

