Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421820_107215 | Not Available | Negative | 4944439 - 4944633 | 6970.6 |
| lyttr dna-binding domain-containing protein | SAMN05421820_107216 | Not Available | Negative | 4944716 - 4945108 | 15086.3 |
| hypothetical protein | SAMN05421820_107217 | Not Available | Positive | 4945546 - 4946343 | 30223.7 |
| hypothetical protein | SAMN05421820_107218 | Not Available | Negative | 4946454 - 4946615 | 5796.96 |
| dna (cytosine-5)-methyltransferase 1 | SAMN05421820_107219 | Not Available | Positive | 4947085 - 4948680 | 60344.4 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05421820_107220 | Not Available | Positive | 4948705 - 4950231 | 58769.3 |
| z1 domain-containing protein | SAMN05421820_107221 | Not Available | Positive | 4950235 - 4953393 | 119898.0 |
| putative pd-(d/e)xk family member | SAMN05421820_107222 | Not Available | Positive | 4953400 - 4954368 | 36863.2 |
| aipr protein | SAMN05421820_107223 | Not Available | Positive | 4954368 - 4956770 | 91581.4 |
| dna mismatch endonuclease, patch repair protein | SAMN05421820_107224 | Not Available | Negative | 4956965 - 4957402 | 17156.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

