Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dual-action heigh metallo-peptidase | SAMN05421820_107135 | Not Available | Positive | 4866135 - 4866920 | 28499.0 |
| protein of unknown function | SAMN05421820_107136 | Not Available | Positive | 4867104 - 4867382 | 10630.7 |
| hypothetical protein | SAMN05421820_107137 | Not Available | Negative | 4867441 - 4867989 | 20489.0 |
| fimbrial assembly protein (piln) | SAMN05421820_107138 | Not Available | Negative | 4867991 - 4869184 | 45142.8 |
| type iv pilus assembly protein pilq | SAMN05421820_107139 | Not Available | Negative | 4869186 - 4871150 | 72453.5 |
| general secretion pathway protein e/type iv pilus assembly protein pilb | SAMN05421820_107140 | Not Available | Negative | 4871150 - 4872589 | 54184.5 |
| hypothetical protein | SAMN05421820_107141 | Not Available | Negative | 4872589 - 4873104 | 19776.0 |
| type iv pilus assembly protein pile | SAMN05421820_107142 | Not Available | Negative | 4873104 - 4873523 | 15549.8 |
| hypothetical protein | SAMN05421820_107143 | Not Available | Negative | 4873586 - 4874284 | 25947.1 |
| hypothetical protein | SAMN05421820_107144 | Not Available | Negative | 4874286 - 4875350 | 39593.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

