Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_10785 | Not Available | Negative | 4817578 - 4818129 | 21712.3 |
| hypothetical protein | SAMN05421820_10786 | Not Available | Negative | 4818391 - 4818702 | 11950.5 |
| putative metalloprotease | SAMN05421820_10787 | Not Available | Positive | 4819016 - 4819795 | 27948.2 |
| undecaprenyl-diphosphatase | SAMN05421820_10788 | Not Available | Negative | 4819922 - 4820539 | 22653.7 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN05421820_10789 | Not Available | Positive | 4820594 - 4821781 | 43998.0 |
| protein of unknown function | SAMN05421820_10790 | Not Available | Negative | 4821849 - 4822604 | 29407.6 |
| hypothetical protein | SAMN05421820_10791 | Not Available | Positive | 4822703 - 4822957 | 9219.65 |
| 2,4-dienoyl-coa reductase | SAMN05421820_10792 | Not Available | Negative | 4823012 - 4824118 | 40525.9 |
| arsr family transcriptional regulator | SAMN05421820_10793 | Not Available | Negative | 4824130 - 4824531 | 14977.2 |
| zn-dependent amino-or carboxypeptidase, m28 family | SAMN05421820_10794 | Not Available | Positive | 4824594 - 4826264 | 61369.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

