Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_101384 | Not Available | Negative | 476908 - 480234 | 123368.0 |
| fecr protein | SAMN05421820_101385 | Not Available | Negative | 480492 - 481667 | 43693.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_101386 | Not Available | Negative | 481757 - 482335 | 22240.9 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN05421820_101387 | Not Available | Positive | 482500 - 484686 | 81955.4 |
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN05421820_101388 | Not Available | Negative | 484683 - 485291 | 23348.0 |
| aminodeoxyfutalosine synthase | SAMN05421820_101389 | Not Available | Positive | 485478 - 486671 | 46281.0 |
| probable phosphoglycerate mutase | SAMN05421820_101390 | Not Available | Positive | 486671 - 487282 | 23045.2 |
| chorismate dehydratase | SAMN05421820_101391 | Not Available | Positive | 487290 - 488015 | 27114.7 |
| dna mismatch repair protein muts | SAMN05421820_101392 | Not Available | Positive | 488061 - 490706 | 99319.9 |
| lipoprotein spr/probable lipoprotein nlpc | SAMN05421820_101393 | Not Available | Positive | 490706 - 491227 | 19265.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

