Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphinothricin acetyltransferase | SAMN05421820_10124 | Not Available | Negative | 50610 - 51092 | 18626.5 |
| pas domain s-box-containing protein | SAMN05421820_10125 | Not Available | Negative | 51139 - 51939 | 30494.1 |
| hypothetical protein | SAMN05421820_10126 | Not Available | Positive | 52170 - 53084 | 33915.4 |
| dna repair protein radc | SAMN05421820_10127 | Not Available | Negative | 53147 - 53443 | 10815.3 |
| hypothetical protein | SAMN05421820_10128 | Not Available | Negative | 53634 - 54044 | 15318.5 |
| dna-binding response regulator, lytr/algr family | SAMN05421820_10129 | Not Available | Negative | 54382 - 55125 | 28603.7 |
| ghkl domain-containing protein | SAMN05421820_10130 | Not Available | Negative | 55112 - 56188 | 40988.1 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421820_10131 | Not Available | Negative | 56214 - 56804 | 21292.7 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421820_10132 | Not Available | Positive | 57027 - 57614 | 22902.5 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN05421820_10133 | Not Available | Positive | 57732 - 58790 | 40065.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

