Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal-protein-alanine n-acetyltransferase | SAMN05421820_10755 | Not Available | Negative | 4781537 - 4782145 | 23195.1 |
| d-methionine transport system atp-binding protein | SAMN05421820_10756 | Not Available | Positive | 4782242 - 4783273 | 37754.9 |
| d-methionine transport system permease protein | SAMN05421820_10757 | Not Available | Positive | 4783266 - 4783919 | 23307.5 |
| d-methionine transport system substrate-binding protein | SAMN05421820_10758 | Not Available | Positive | 4783945 - 4784766 | 29775.9 |
| protein of unknown function | SAMN05421820_10759 | Not Available | Negative | 4784911 - 4785633 | 26319.3 |
| starch-binding associating with outer membrane | SAMN05421820_10760 | Not Available | Negative | 4785652 - 4787445 | 67035.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_10761 | Not Available | Negative | 4787464 - 4790916 | 128442.0 |
| fecr protein | SAMN05421820_10762 | Not Available | Negative | 4791156 - 4792328 | 43766.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_10763 | Not Available | Negative | 4792402 - 4793001 | 22977.8 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN05421820_10764 | Not Available | Positive | 4793506 - 4794393 | 31899.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

