Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase / selenocysteine lyase | SAMN05421820_106468 | Not Available | Positive | 4692502 - 4693755 | 46286.8 |
| cysteine desulfuration protein sufe | SAMN05421820_106469 | Not Available | Positive | 4693782 - 4694216 | 16182.7 |
| ubie/coq5 methyltransferase family protein | SAMN05421820_106470 | Not Available | Positive | 4694261 - 4695076 | 29724.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_106471 | Not Available | Positive | 4695213 - 4695800 | 22585.3 |
| fecr protein | SAMN05421820_106472 | Not Available | Positive | 4695900 - 4697051 | 42901.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_106473 | Not Available | Positive | 4697361 - 4700618 | 119137.0 |
| starch-binding associating with outer membrane | SAMN05421820_106474 | Not Available | Positive | 4700638 - 4702086 | 53835.4 |
| pdz domain-containing protein | SAMN05421820_106475 | Not Available | Positive | 4702110 - 4704476 | 87571.5 |
| nad(p)h dehydrogenase (quinone) | SAMN05421820_106476 | Not Available | Positive | 4704602 - 4705222 | 23565.1 |
| tonb-dependent receptor | SAMN05421820_106477 | Not Available | Negative | 4705265 - 4708561 | 119703.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

