Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein, contains a nrps condensation (elongation) domain | SAMN05421820_106458 | Not Available | Positive | 4679714 - 4680967 | 47254.1 |
| condensation domain-containing protein | SAMN05421820_106459 | Not Available | Positive | 4680964 - 4682235 | 47653.1 |
| hypothetical protein | SAMN05421820_106460 | Not Available | Positive | 4682228 - 4682725 | 18583.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_106461 | Not Available | Positive | 4682919 - 4683488 | 22391.1 |
| fecr protein | SAMN05421820_106462 | Not Available | Positive | 4683547 - 4684695 | 42723.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_106463 | Not Available | Positive | 4684917 - 4688306 | 124265.0 |
| susd family protein | SAMN05421820_106464 | Not Available | Positive | 4688311 - 4689705 | 51426.5 |
| peroxiredoxin | SAMN05421820_106465 | Not Available | Positive | 4689717 - 4690799 | 39932.0 |
| glutathione synthetase, atp-grasp domain | SAMN05421820_106466 | Not Available | Negative | 4690867 - 4691733 | 32943.0 |
| metal binding domain of ada | SAMN05421820_106467 | Not Available | Negative | 4691764 - 4692024 | 9875.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

