Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN05421820_106417 | Not Available | Positive | 4624075 - 4624458 | 14358.2 |
| mechanosensitive ion channel | SAMN05421820_106418 | Not Available | Positive | 4624608 - 4626986 | 88885.4 |
| peptidyl-dipeptidase dcp | SAMN05421820_106419 | Not Available | Negative | 4627124 - 4629148 | 76338.5 |
| hypothetical protein | SAMN05421820_106420 | Not Available | Negative | 4629090 - 4629236 | 5599.5 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421820_106421 | Not Available | Positive | 4629340 - 4630323 | 36588.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN05421820_106422 | Not Available | Positive | 4630500 - 4631015 | 18340.5 |
| sigma-70, region 4 | SAMN05421820_106423 | Not Available | Positive | 4631335 - 4631808 | 18150.7 |
| hypothetical protein | SAMN05421820_106424 | Not Available | Positive | 4631798 - 4632295 | 19001.7 |
| grpb domain, predicted nucleotidyltransferase, upf0157 family | SAMN05421820_106425 | Not Available | Positive | 4632298 - 4632900 | 22840.4 |
| protein of unknown function | SAMN05421820_106426 | Not Available | Positive | 4632976 - 4633422 | 15919.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

