Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoinositide phospholipase c, ca2+-dependent | SAMN05421820_106407 | Not Available | Negative | 4610140 - 4611375 | 46212.4 |
| tonb-dependent receptor | SAMN05421820_106408 | Not Available | Negative | 4611385 - 4614198 | 104790.0 |
| arac-type dna-binding protein | SAMN05421820_106409 | Not Available | Negative | 4614356 - 4615429 | 42325.0 |
| signal transduction histidine kinase | SAMN05421820_106410 | Not Available | Positive | 4615576 - 4617453 | 71378.4 |
| signal transduction histidine kinase | SAMN05421820_106411 | Not Available | Positive | 4617538 - 4619412 | 71056.1 |
| hypothetical protein | SAMN05421820_106412 | Not Available | Negative | 4619453 - 4619914 | 17306.0 |
| fucose permease | SAMN05421820_106413 | Not Available | Positive | 4620180 - 4621313 | 39805.3 |
| predicted arabinose efflux permease, mfs family | SAMN05421820_106414 | Not Available | Positive | 4621775 - 4623010 | 45676.2 |
| arac-type dna-binding protein | SAMN05421820_106415 | Not Available | Positive | 4623095 - 4623916 | 31003.1 |
| hypothetical protein | SAMN05421820_106416 | Not Available | Positive | 4623882 - 4624106 | 8847.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

