Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulator of rnase e activity rraa | SAMN05421820_106367 | Not Available | Positive | 4570091 - 4570747 | 24195.3 |
| saf domain-containing protein | SAMN05421820_106368 | Not Available | Positive | 4570750 - 4571052 | 11061.6 |
| altronate hydrolase | SAMN05421820_106369 | Not Available | Positive | 4571057 - 4572250 | 42596.3 |
| l-fucose:h+ symporter permease | SAMN05421820_106370 | Not Available | Positive | 4572275 - 4575478 | 118631.0 |
| ubiquinone biosynthesis protein | SAMN05421820_106371 | Not Available | Positive | 4575621 - 4577288 | 62220.4 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421820_106372 | Not Available | Positive | 4577485 - 4578099 | 23750.0 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421820_106373 | Not Available | Positive | 4578083 - 4578985 | 34970.8 |
| hypothetical protein | SAMN05421820_106374 | Not Available | Negative | 4579013 - 4579318 | 11777.8 |
| hypothetical protein | SAMN05421820_106375 | Not Available | Positive | 4579708 - 4580691 | 36372.5 |
| hypothetical protein | SAMN05421820_106376 | Not Available | Positive | 4580783 - 4580983 | 7580.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

