Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease z | SAMN05421820_101363 | Not Available | Positive | 447139 - 448050 | 34344.2 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN05421820_101364 | Not Available | Negative | 448156 - 449109 | 33877.1 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05421820_101365 | Not Available | Negative | 449124 - 449969 | 31685.0 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05421820_101366 | Not Available | Negative | 450009 - 450878 | 32252.7 |
| hypothetical protein | SAMN05421820_101367 | Not Available | Positive | 450944 - 453685 | 101922.0 |
| nicotinamide-nucleotide amidase | SAMN05421820_101368 | Not Available | Positive | 453696 - 454943 | 45747.5 |
| 2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase) | SAMN05421820_101369 | Not Available | Positive | 454994 - 456325 | 48033.9 |
| homoserine dehydrogenase | SAMN05421820_101370 | Not Available | Negative | 456421 - 457662 | 46661.7 |
| homoserine o-acetyltransferase | SAMN05421820_101371 | Not Available | Negative | 457670 - 458728 | 39188.5 |
| o-acetylhomoserine sulfhydrylase | SAMN05421820_101372 | Not Available | Negative | 458732 - 460039 | 46904.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

