Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuconate dehydratase | SAMN05421820_106337 | Not Available | Positive | 4538912 - 4540138 | 45363.5 |
| solute:na+ symporter, sss family | SAMN05421820_106338 | Not Available | Positive | 4540149 - 4541792 | 59974.6 |
| l-rhamnose mutarotase | SAMN05421820_106339 | Not Available | Positive | 4541812 - 4542210 | 15350.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421820_106340 | Not Available | Positive | 4542246 - 4543016 | 27104.6 |
| arac-like ligand binding domain-containing protein | SAMN05421820_106341 | Not Available | Negative | 4543021 - 4543938 | 35188.9 |
| alpha-l-fucosidase | SAMN05421820_106342 | Not Available | Positive | 4544057 - 4545412 | 51006.3 |
| protein of unknown function (du1801) | SAMN05421820_106343 | Not Available | Negative | 4545445 - 4545867 | 15803.2 |
| predicted dehydrogenase | SAMN05421820_106344 | Not Available | Positive | 4546071 - 4547312 | 45684.2 |
| protein of unknown function | SAMN05421820_106345 | Not Available | Positive | 4547526 - 4548221 | 25594.9 |
| dna-binding transcriptional regulator, hxlr family | SAMN05421820_106346 | Not Available | Positive | 4548239 - 4548547 | 11371.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

