Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421820_106327 | Not Available | Positive | 4522799 - 4523746 | 36837.3 |
| hypothetical protein | SAMN05421820_106328 | Not Available | Negative | 4523811 - 4524482 | 25504.7 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05421820_106329 | Not Available | Negative | 4524559 - 4525644 | 40624.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421820_106330 | Not Available | Positive | 4526414 - 4526983 | 22212.7 |
| fecr protein | SAMN05421820_106331 | Not Available | Positive | 4527085 - 4528215 | 41963.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_106332 | Not Available | Positive | 4528385 - 4531780 | 125272.0 |
| starch-binding associating with outer membrane | SAMN05421820_106333 | Not Available | Positive | 4531795 - 4533618 | 67310.1 |
| fibronectin type iii domain-containing protein | SAMN05421820_106334 | Not Available | Positive | 4533631 - 4534512 | 33395.1 |
| hexosaminidase | SAMN05421820_106335 | Not Available | Positive | 4534573 - 4536996 | 91093.4 |
| f5/8 type c domain-containing protein | SAMN05421820_106336 | Not Available | Positive | 4536993 - 4538615 | 59680.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

