Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421820_106317 | Not Available | Positive | 4509529 - 4509912 | 14482.5 |
| peptide-methionine (s)-s-oxide reductase | SAMN05421820_106318 | Not Available | Positive | 4509981 - 4510472 | 18482.5 |
| hypothetical protein | SAMN05421820_106319 | Not Available | Negative | 4510701 - 4512233 | 56688.7 |
| hypothetical protein | SAMN05421820_106320 | Not Available | Negative | 4512258 - 4512896 | 23093.8 |
| nipsnap protein | SAMN05421820_106321 | Not Available | Positive | 4513416 - 4513721 | 11788.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421820_106322 | Not Available | Positive | 4513842 - 4514381 | 20282.7 |
| dinb superfamily protein | SAMN05421820_106323 | Not Available | Positive | 4514442 - 4514990 | 20911.8 |
| phospholipase c | SAMN05421820_106324 | Not Available | Negative | 4515055 - 4517493 | 92767.1 |
| starch-binding associating with outer membrane | SAMN05421820_106325 | Not Available | Negative | 4517567 - 4519051 | 55897.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421820_106326 | Not Available | Negative | 4519084 - 4522227 | 116331.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

