Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter steynii |
| Strain | strain DSM 19110 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2344384 bp
Thymine Count
2349892 bp
Guanine Count
1702492 bp
Cytosine Count
1663617 bp
Genome Length
8060701 bp
Protein-coding Genes
6672 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | SAMN05421820_106277 | Not Available | Negative | 4462814 - 4463563 | 28015.9 |
| glutamine amidotransferase | SAMN05421820_106278 | Not Available | Negative | 4463565 - 4464158 | 21973.5 |
| imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase | SAMN05421820_106279 | Not Available | Negative | 4464158 - 4465291 | 42653.8 |
| histidinol-phosphate aminotransferase | SAMN05421820_106280 | Not Available | Negative | 4465294 - 4466340 | 38923.7 |
| histidinol dehydrogenase | SAMN05421820_106281 | Not Available | Negative | 4466342 - 4467628 | 46375.5 |
| atp phosphoribosyltransferase | SAMN05421820_106282 | Not Available | Negative | 4467635 - 4468486 | 30728.6 |
| l,d-transpeptidase catalytic domain | SAMN05421820_106283 | Not Available | Positive | 4468759 - 4470354 | 61282.9 |
| n-terminal double-transmembrane domain-containing protein | SAMN05421820_106284 | Not Available | Positive | 4470376 - 4472421 | 76222.9 |
| dihydroorotase | SAMN05421820_106285 | Not Available | Positive | 4472418 - 4473680 | 45384.5 |
| hypothetical protein | SAMN05421820_106286 | Not Available | Positive | 4473673 - 4474344 | 26184.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

